Loading dataset...
dsx1Dmagna002157Dapma7bEVm…or a product keywordExplore genes, transcripts, expression, protein evidence, and CRISPR targets across Daphnia magna assemblies.
Compare expression across eggs and six dissected adult sample types using three biological replicates.
Paste up to 500 gene IDs. The workbook contains a sample-type summary, replicate-level expression values, reported read counts, and provenance.
Compare expression in 40-hour NIES embryos: WT female, Dsx1 Line A/B male, and WT male, mapped to current RefSeq GeneIDs.
Search the selected protein against UniProtKB/Swiss-Prot (reviewed) to identify annotation and gene-symbol candidates.
Select and align up to 100 homologous proteins from 22 non-Daphnia animal reference proteomes, then build a phylogenetic tree.
View integrated domains, active sites, GO terms, and pathways along protein coordinates.
Use OrthoFinder HOG/ortholog results and conserved-protein evidence to suggest candidate gene names.
Review target-region variant evidence, joint genotypes, lab-stock differences, and genome-wide screening candidates in published LRV0_1 coordinates.
| Sample | Gene | Location | REF→ALT | GT | DP | AD | VAF | Cut distance |
|---|
| Class | Sample | Gene | Location | Type | DP | GQ | VAF | Feature | Comparators |
|---|
| Guide | Sample | Location | Mismatch | REF→ALT | DP | VAF | Coverage status | Classification |
|---|
Set flanking bases and download DNA, GenBank, or protein FASTA.
Design a PCR pair around a pasted target, or test your own pair against the selected Daphnia genome.
| Rank | gRNA / PAM | Cut | Scores | Off-target | RNP test primers |
|---|
Measure straight-line body length between a reviewed compound-eye landmark (A) and the tail-spine attachment to the carapace (B).
One row per saved image, including landmark coordinates, calibration, and review status.
| Sample | Group | Age | BL (mm) | BL (µm) | Pixels | µm/px | QC |
|---|---|---|---|---|---|---|---|
| No reviewed measurements saved in this session. | |||||||